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# Auto-anchor utils
# YOLOv5 🚀 by Ultralytics, GPL-3.0 license
"""
AutoAnchor utils
"""
import random
import numpy as np
import torch
import yaml
from scipy.cluster.vq import kmeans
from tqdm import tqdm
from Y5.utils.general import colorstr
from utils.general import LOGGER, colorstr, emojis
PREFIX = colorstr('AutoAnchor: ')
def check_anchor_order(m):
# Check anchor order against stride order for YOLOv5 Detect() module m, and correct if necessary
a = m.anchor_grid.prod(-1).view(-1) # anchor area
a = m.anchors.prod(-1).mean(-1).view(-1) # mean anchor area per output layer
da = a[-1] - a[0] # delta a
ds = m.stride[-1] - m.stride[0] # delta s
if da.sign() != ds.sign(): # same order
print('Reversing anchor order')
if da and (da.sign() != ds.sign()): # same order
LOGGER.info(f'{PREFIX}Reversing anchor order')
m.anchors[:] = m.anchors.flip(0)
m.anchor_grid[:] = m.anchor_grid.flip(0)
def check_anchors(dataset, model, thr=4.0, imgsz=640):
# Check anchor fit to data, recompute if necessary
prefix = colorstr('autoanchor: ')
print(f'\n{prefix}Analyzing anchors... ', end='')
m = model.module.model[-1] if hasattr(model, 'module') else model.model[-1] # Detect()
shapes = imgsz * dataset.shapes / dataset.shapes.max(1, keepdims=True)
scale = np.random.uniform(0.9, 1.1, size=(shapes.shape[0], 1)) # augment scale
@@ -31,35 +34,42 @@ def check_anchors(dataset, model, thr=4.0, imgsz=640):
def metric(k): # compute metric
r = wh[:, None] / k[None]
x = torch.min(r, 1. / r).min(2)[0] # ratio metric
x = torch.min(r, 1 / r).min(2)[0] # ratio metric
best = x.max(1)[0] # best_x
aat = (x > 1. / thr).float().sum(1).mean() # anchors above threshold
bpr = (best > 1. / thr).float().mean() # best possible recall
aat = (x > 1 / thr).float().sum(1).mean() # anchors above threshold
bpr = (best > 1 / thr).float().mean() # best possible recall
return bpr, aat
bpr, aat = metric(m.anchor_grid.clone().cpu().view(-1, 2))
print(f'anchors/target = {aat:.2f}, Best Possible Recall (BPR) = {bpr:.4f}', end='')
if bpr < 0.98: # threshold to recompute
print('. Attempting to improve anchors, please wait...')
na = m.anchor_grid.numel() // 2 # number of anchors
new_anchors = kmean_anchors(dataset, n=na, img_size=imgsz, thr=thr, gen=1000, verbose=False)
new_bpr = metric(new_anchors.reshape(-1, 2))[0]
stride = m.stride.to(m.anchors.device).view(-1, 1, 1) # model strides
anchors = m.anchors.clone() * stride # current anchors
bpr, aat = metric(anchors.cpu().view(-1, 2))
s = f'\n{PREFIX}{aat:.2f} anchors/target, {bpr:.3f} Best Possible Recall (BPR). '
if bpr > 0.98: # threshold to recompute
LOGGER.info(emojis(f'{s}Current anchors are a good fit to dataset ✅'))
else:
LOGGER.info(emojis(f'{s}Anchors are a poor fit to dataset ⚠️, attempting to improve...'))
na = m.anchors.numel() // 2 # number of anchors
try:
anchors = kmean_anchors(dataset, n=na, img_size=imgsz, thr=thr, gen=1000, verbose=False)
except Exception as e:
LOGGER.info(f'{PREFIX}ERROR: {e}')
new_bpr = metric(anchors)[0]
if new_bpr > bpr: # replace anchors
new_anchors = torch.tensor(new_anchors, device=m.anchors.device).type_as(m.anchors)
m.anchor_grid[:] = new_anchors.clone().view_as(m.anchor_grid) # for inference
m.anchors[:] = new_anchors.clone().view_as(m.anchors) / m.stride.to(m.anchors.device).view(-1, 1, 1) # loss
check_anchor_order(m)
print(f'{prefix}New anchors saved to model. Update model *.yaml to use these anchors in the future.')
anchors = torch.tensor(anchors, device=m.anchors.device).type_as(m.anchors)
m.anchors[:] = anchors.clone().view_as(m.anchors)
check_anchor_order(m) # must be in pixel-space (not grid-space)
m.anchors /= stride
s = f'{PREFIX}Done ✅ (optional: update model *.yaml to use these anchors in the future)'
else:
print(f'{prefix}Original anchors better than new anchors. Proceeding with original anchors.')
print('') # newline
s = f'{PREFIX}Done ⚠️ (original anchors better than new anchors, proceeding with original anchors)'
LOGGER.info(emojis(s))
def kmean_anchors(path='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=1000, verbose=True):
def kmean_anchors(dataset='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=1000, verbose=True):
""" Creates kmeans-evolved anchors from training dataset
Arguments:
path: path to dataset *.yaml, or a loaded dataset
dataset: path to data.yaml, or a loaded dataset
n: number of anchors
img_size: image size used for training
thr: anchor-label wh ratio threshold hyperparameter hyp['anchor_t'] used for training, default=4.0
@@ -72,12 +82,14 @@ def kmean_anchors(path='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=10
Usage:
from utils.autoanchor import *; _ = kmean_anchors()
"""
thr = 1. / thr
prefix = colorstr('autoanchor: ')
from scipy.cluster.vq import kmeans
npr = np.random
thr = 1 / thr
def metric(k, wh): # compute metrics
r = wh[:, None] / k[None]
x = torch.min(r, 1. / r).min(2)[0] # ratio metric
x = torch.min(r, 1 / r).min(2)[0] # ratio metric
# x = wh_iou(wh, torch.tensor(k)) # iou metric
return x, x.max(1)[0] # x, best_x
@@ -85,24 +97,24 @@ def kmean_anchors(path='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=10
_, best = metric(torch.tensor(k, dtype=torch.float32), wh)
return (best * (best > thr).float()).mean() # fitness
def print_results(k):
def print_results(k, verbose=True):
k = k[np.argsort(k.prod(1))] # sort small to large
x, best = metric(k, wh0)
bpr, aat = (best > thr).float().mean(), (x > thr).float().mean() * n # best possible recall, anch > thr
print(f'{prefix}thr={thr:.2f}: {bpr:.4f} best possible recall, {aat:.2f} anchors past thr')
print(f'{prefix}n={n}, img_size={img_size}, metric_all={x.mean():.3f}/{best.mean():.3f}-mean/best, '
f'past_thr={x[x > thr].mean():.3f}-mean: ', end='')
for i, x in enumerate(k):
print('%i,%i' % (round(x[0]), round(x[1])), end=', ' if i < len(k) - 1 else '\n') # use in *.cfg
s = f'{PREFIX}thr={thr:.2f}: {bpr:.4f} best possible recall, {aat:.2f} anchors past thr\n' \
f'{PREFIX}n={n}, img_size={img_size}, metric_all={x.mean():.3f}/{best.mean():.3f}-mean/best, ' \
f'past_thr={x[x > thr].mean():.3f}-mean: '
for x in k:
s += '%i,%i, ' % (round(x[0]), round(x[1]))
if verbose:
LOGGER.info(s[:-2])
return k
if isinstance(path, str): # *.yaml file
with open(path) as f:
data_dict = yaml.load(f, Loader=yaml.SafeLoader) # model dict
from utils.datasets import LoadImagesAndLabels
if isinstance(dataset, str): # *.yaml file
with open(dataset, errors='ignore') as f:
data_dict = yaml.safe_load(f) # model dict
from utils.dataloaders import LoadImagesAndLabels
dataset = LoadImagesAndLabels(data_dict['train'], augment=True, rect=True)
else:
dataset = path # dataset
# Get label wh
shapes = img_size * dataset.shapes / dataset.shapes.max(1, keepdims=True)
@@ -111,18 +123,22 @@ def kmean_anchors(path='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=10
# Filter
i = (wh0 < 3.0).any(1).sum()
if i:
print(f'{prefix}WARNING: Extremely small objects found. {i} of {len(wh0)} labels are < 3 pixels in size.')
LOGGER.info(f'{PREFIX}WARNING: Extremely small objects found: {i} of {len(wh0)} labels are < 3 pixels in size')
wh = wh0[(wh0 >= 2.0).any(1)] # filter > 2 pixels
# wh = wh * (np.random.rand(wh.shape[0], 1) * 0.9 + 0.1) # multiply by random scale 0-1
# wh = wh * (npr.rand(wh.shape[0], 1) * 0.9 + 0.1) # multiply by random scale 0-1
# Kmeans calculation
print(f'{prefix}Running kmeans for {n} anchors on {len(wh)} points...')
s = wh.std(0) # sigmas for whitening
k, dist = kmeans(wh / s, n, iter=30) # points, mean distance
k *= s
wh = torch.tensor(wh, dtype=torch.float32) # filtered
wh0 = torch.tensor(wh0, dtype=torch.float32) # unfiltered
k = print_results(k)
# Kmeans init
try:
LOGGER.info(f'{PREFIX}Running kmeans for {n} anchors on {len(wh)} points...')
assert n <= len(wh) # apply overdetermined constraint
s = wh.std(0) # sigmas for whitening
k = kmeans(wh / s, n, iter=30)[0] * s # points
assert n == len(k) # kmeans may return fewer points than requested if wh is insufficient or too similar
except Exception:
LOGGER.warning(f'{PREFIX}WARNING: switching strategies from kmeans to random init')
k = np.sort(npr.rand(n * 2)).reshape(n, 2) * img_size # random init
wh, wh0 = (torch.tensor(x, dtype=torch.float32) for x in (wh, wh0))
k = print_results(k, verbose=False)
# Plot
# k, d = [None] * 20, [None] * 20
@@ -137,19 +153,18 @@ def kmean_anchors(path='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=10
# fig.savefig('wh.png', dpi=200)
# Evolve
npr = np.random
f, sh, mp, s = anchor_fitness(k), k.shape, 0.9, 0.1 # fitness, generations, mutation prob, sigma
pbar = tqdm(range(gen), desc=f'{prefix}Evolving anchors with Genetic Algorithm:') # progress bar
pbar = tqdm(range(gen), bar_format='{l_bar}{bar:10}{r_bar}{bar:-10b}') # progress bar
for _ in pbar:
v = np.ones(sh)
while (v == 1).all(): # mutate until a change occurs (prevent duplicates)
v = ((npr.random(sh) < mp) * npr.random() * npr.randn(*sh) * s + 1).clip(0.3, 3.0)
v = ((npr.random(sh) < mp) * random.random() * npr.randn(*sh) * s + 1).clip(0.3, 3.0)
kg = (k.copy() * v).clip(min=2.0)
fg = anchor_fitness(kg)
if fg > f:
f, k = fg, kg.copy()
pbar.desc = f'{prefix}Evolving anchors with Genetic Algorithm: fitness = {f:.4f}'
pbar.desc = f'{PREFIX}Evolving anchors with Genetic Algorithm: fitness = {f:.4f}'
if verbose:
print_results(k)
print_results(k, verbose)
return print_results(k)